CrossRefs 0.1

From BioSchemas

Revision as of 09:02, 17 May 2006; view current revision
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Contents

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Specification

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schema http://schemas.bioservices.net/2006/01/crossrefs

code 

<xs:schema xmlns:cr="http://schemas.bioservices.net/2006/01/crossrefs" xmlns:xs="http://www.w3.org/2001/XMLSchema" xmlns:bt="http://schemas.bioservices.net/2006/01/biotypes" xmlns:xlink="http://www.w3.org/1999/xlink" targetNamespace="http://schemas.bioservices.net/2006/01/crossrefs" elementFormDefault="qualified" attributeFormDefault="unqualified" id="crossrefs" version="0.1" xml:lang="en"/>

documentation

The CrossRefs (Cross References) schema is a building block for including references to biological databases, websites, etc. into an XML document.

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import http://schemas.bioservices.net/2006/01/biotypes

code 

<xs:import schemaLocation="biotypes_1.1.xsd" namespace="http://schemas.bioservices.net/2006/01/biotypes"/>

documentation

The CrossRefs schema supports cross references based on LSIDs as well as on BioTypes sources.


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Basics


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complexType abstractReference

code 

<xs:complexType name="abstractReference" abstract="true">
  <xs:anyAttribute namespace="##other" processContents="lax"/>
</xs:complexType>
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element abstractReference

code 

<xs:element name="abstractReference" type="cr:abstractReference" abstract="true"/>
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simpleType schemaVersion

code 

<xs:simpleType name="schemaVersion">
  <xs:restriction base="xs:string">
    <xs:enumeration value="0.1"/>
  </xs:restriction>
</xs:simpleType>

documentation

List of valid versions.

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complexType crossRefs

code 

<xs:complexType name="crossRefs">
  <xs:choice minOccurs="1" maxOccurs="unbounded">
    <xs:element ref="cr:abstractReference"/>
  </xs:choice>
  <xs:attribute name="schemaVersion" type="cr:schemaVersion" use="optional"/>
  <xs:anyAttribute namespace="##other" processContents="lax"/>
</xs:complexType>
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element crossRefs

code 

<xs:element name="crossRefs" type="cr:crossRefs"/>


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Database


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simpleType databaseName

code 

<xs:simpleType name="databaseName">
  <xs:restriction base="xs:token">
    <xs:minLength value="1"/>
  </xs:restriction>
</xs:simpleType>
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simpleType databaseEntry

code 

<xs:simpleType name="databaseEntry">
  <xs:restriction base="xs:token">
    <xs:minLength value="1"/>
  </xs:restriction>
</xs:simpleType>
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simpleType databaseURL

code 

<xs:simpleType name="databaseURL">
  <xs:restriction base="xs:anyURI"/>
</xs:simpleType>
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complexType databaseReference

code 

<xs:complexType name="databaseReference">
  <xs:complexContent>
    <xs:extension base="cr:abstractReference">
      <xs:attribute name="name" type="cr:databaseName" use="required"/>
      <xs:attribute name="entry" type="cr:databaseEntry" use="required"/>
      <xs:attribute name="url" type="cr:databaseURL" use="optional"/>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element database

code 

<xs:element name="database" type="cr:databaseReference" substitutionGroup="cr:abstractReference"/>


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URL


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complexType urlReference

code 

<xs:complexType name="urlReference">
  <xs:complexContent>
    <xs:extension base="cr:abstractReference">
      <xs:attribute name="href" type="xs:anyURI" use="required"/>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element url

code 

<xs:element name="url" type="cr:urlReference" substitutionGroup="cr:abstractReference"/>


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LSID


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complexType lsidReference

code 

<xs:complexType name="lsidReference">
  <xs:complexContent>
    <xs:extension base="cr:abstractReference">
      <xs:attribute name="value" type="bt:lsid" use="required"/>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element lsid

code 

<xs:element name="lsid" type="cr:lsidReference" substitutionGroup="cr:abstractReference"/>


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XLink


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complexType xlinkReference

code 

<xs:complexType name="xlinkReference">
  <xs:complexContent>
    <xs:extension base="cr:abstractReference">
      <xs:anyAttribute namespace="http://www.w3.org/1999/xlink" processContents="strict"/>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element xlink

code 

<xs:element name="xlink" type="cr:xlinkReference" substitutionGroup="cr:abstractReference"/>


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Source


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complexType sourceReference

code 

<xs:complexType name="sourceReference">
  <xs:complexContent>
    <xs:extension base="cr:abstractReference">
      <xs:attribute name="uri" type="bt:sourceUri" use="required"/>
      <xs:attribute name="accNumber" type="bt:accessionNumber" use="required"/>
      <xs:attribute name="date" type="bt:sourceDate" use="optional"/>
      <xs:attribute name="version" type="bt:sourceVersion" use="optional"/>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element source

code 

<xs:element name="source" type="cr:sourceReference" substitutionGroup="cr:abstractReference"/>


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User


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complexType userReference

code 

<xs:complexType name="userReference">
  <xs:complexContent mixed="true">
    <xs:extension base="cr:abstractReference">
      <xs:sequence minOccurs="0" maxOccurs="unbounded">
        <xs:any namespace="##any" processContents="skip"/>
      </xs:sequence>
    </xs:extension>
  </xs:complexContent>
</xs:complexType>
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element user

code 

<xs:element name="user" type="cr:userReference" substitutionGroup="cr:abstractReference"/>
Retrieved from "http://bioschemas.sourceforge.net/index.php/CrossRefs_0.1"
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